HACD4

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HACD4 mutation is significantly associated with the RNA expression of many other genes, with 509 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible HACD4-associated genes across cancer lineages are ZNHIT3, RNA5SP414, and TUBGCP5. Each is linked with HACD4 in more than 1 cancer types. Because this analysis shows association rather than direction, both HACD4-to-partner and partner-to-HACD4 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HACD4→partner) and Y-score (partner→HACD4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECZNHIT3 →+0.545+3.245.002.00831
UCECRNA5SP414 →+0.557+2.577<.001.00431
UCECTUBGCP5 →+0.463+3.370.009.00531
UCECUHRF1 →+1.153+3.595<.001.00131
UCECSTMN1P1 →+0.420+2.693.003.00931
UCECRNA5SP411 →+1.109+2.171.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 509 associations by consensus.

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