H3Y1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, H3Y1 RNA differs between tumor and matched normal tissue in 2 of 18 cancer types tested, making tumor–normal expression one of H3Y1’s most consistent transcriptional readouts.

The strongest signal is observed in breast invasive carcinoma (BRCA), where H3Y1 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types H3Y1 is over-expressed in tumor.

BRCA and THCA are the cancer types where H3Y1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in H3Y1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
BRCAAllII,III,IV+0.303<.0014view →
THCAAllIII,IV+0.045.0471view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 2 strongest of 2 lineages.

H3Y1–BRCA

Tumor-vs-normal expression box plot for H3Y1 RNA in BRCA.

Open the BRCA breakdown →

Exploration