H3C3

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, H3C3 RNA expression is significantly associated with the protein abundance of many other proteins, with 16,550 significant associations in total. GBM shows the largest number of these associations.

The most reproducible H3C3-associated proteins across cancer lineages are MKI67_S357, NCAPD2, and NRDC. Each is linked with H3C3 in more than 5 cancer types. Because this analysis shows association rather than direction, both H3C3-to-partner and partner-to-H3C3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, H3C3 versus MKI67_S357 in LUAD, with a Pearson correlation of 0.69.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (H3C3→partner) and Y-score (partner→H3C3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADMKI67_S357 →+1.750+1.450<.001<.00136
GBMNCAPD2 →+0.719+1.555<.001<.00136
GBMNRDC →+0.352+1.582<.001<.00136
LUADMKI67 →+0.875+1.264<.001<.00135
LUADMKI67_S2528 →+1.776+1.645<.001<.00135
LUADMKI67_S2828 →+1.131+1.355<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,550 associations by consensus.

H3C3 vs MKI67_S357 — LUAD

Per-sample scatter of H3C3 vs MKI67_S357 in LUAD (Pearson r = 0.69).

Explore this scatter interactively →

Exploration