H2BC17

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, H2BC17 mutation is significantly associated with the RNA expression of many other genes, with 14 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible H2BC17-associated genes across cancer lineages are RNU6-40P, RNU6-73P, and RNU6-1104P. Each is linked with H2BC17 in more than 1 cancer types. Because this analysis shows association rather than direction, both H2BC17-to-partner and partner-to-H2BC17 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-40P grouped by H2BC17-low versus H2BC17-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (H2BC17→partner) and Y-score (partner→H2BC17) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNU6-40P →+0.448+4.551<.001.00931
UCECRNU6-73P →+0.382+5.226<.001.00331
UCECRNU6-1104P →+0.700+4.852<.001.00631
UCECIGHD1-26 →+1.308+4.484<.001.00931
UCECFAT1P1 →+0.151+5.582.001.00231
UCECRPL36AP53 →+0.264+4.233.003.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 14 associations by consensus.

RNU6-40P by H2BC17 expression — UCEC

Box plot of RNU6-40P in H2BC17-low vs H2BC17-high samples in UCEC.

Explore this box plot interactively →

Exploration