H1-9P

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, H1-9P RNA differs between tumor and matched normal tissue in 12 of 18 cancer types tested, making tumor–normal expression one of H1-9P’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where H1-9P RNA is more highly expressed in tumor relative to normal tissue. In most cancer types H1-9P is over-expressed in tumor, although a few such as UCEC and COAD show the opposite, repressed pattern.

KIRC, UCEC, and COAD are the cancer types where H1-9P tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in H1-9P RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRCAllAll+0.192<.0019view →
UCECAllII,III,IV−0.805<.0016view →
COADAllII,III,IV−0.155<.0016view →
BLCAMaleIV−0.670.0085view →
LUSCFemaleAll−0.196.0065view →
LUADAllIII,IV−0.120.0095view →
BRCAFemaleII,III,IV−0.293<.0014view →
PAADAllAll−0.252.0064view →
KICHAllAll−0.049.0093view →
CHOLAllAll+0.208.0202view →
PRADAllAll−0.126.0032view →
READFemaleAll−0.274.0331view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 12 lineages.

Exploration