GZMB

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GZMB RNA expression is significantly associated with the go_rna of many other GO terms, with 2,136 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible GZMB-associated GO terms across cancer lineages are Negative regulation of calcium ion transport into cytosol, Neural crest formation, and Vacuole organization. Each is linked with GZMB in more than 4 cancer types. Because this analysis shows association rather than direction, both GZMB-to-partner and partner-to-GZMB results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of calcium ion transport into cytosol grouped by GZMB-low versus GZMB-high in OESOPHAGUS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GZMB→partner) and Y-score (partner→GZMB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSNegative regulation of calcium ion transport into cytosol →-0.177-0.640.006.00435
UPPER_AERODIGESTIVE_TRACTNeural crest formation →-0.118-0.536.006.00634
SKINVacuole organization →+0.033+0.352<.001<.00134
OESOPHAGUSExit from mitosis →+0.070+0.646.008.00225
OESOPHAGUSEndosomal transport →+0.059+0.803.001.00434
SKINCytosolic transport →+0.064+0.441.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,136 associations by consensus.

Negative regulation of calcium ion transport into cytosol by GZMB expression — OESOPHAGUS

Box plot of Negative regulation of calcium ion transport into cytosol in GZMB-low vs GZMB-high samples in OESOPHAGUS.

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