GYPB

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GYPB RNA expression is significantly associated with the protein abundance of many other proteins, with 9,399 significant associations in total. GBM shows the largest number of these associations.

The most reproducible GYPB-associated proteins across cancer lineages are CTSF, EIF4G1, and TBC1D24. Each is linked with GYPB in more than 3 cancer types. Because this analysis shows association rather than direction, both GYPB-to-partner and partner-to-GYPB results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GYPB versus CTSF in UCEC, with a Pearson correlation of 0.44.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GYPB→partner) and Y-score (partner→GYPB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCTSF →+0.578+0.659<.001<.00134
CCRCCEIF4G1 →-0.238-0.610<.001<.00134
GBMTBC1D24 →+0.472+0.641<.001<.00133
GBMTMOD2 →+0.527+0.588<.001<.00133
GBMMIF4GD →+0.256+0.730.002.00233
GBMPCMT1 →+0.459+0.955<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,399 associations by consensus.

GYPB vs CTSF — UCEC

Per-sample scatter of GYPB vs CTSF in UCEC (Pearson r = 0.44).

Explore this scatter interactively →

Exploration