GXYLT1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GXYLT1 mutation is significantly associated with the total protein of many other genes, with 32 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GXYLT1-associated genes across cancer lineages are ASNS, 14-3-3_beta, and EGFR_pY1068. Each is linked with GXYLT1 in more than 1 cancer types. Because this analysis shows association rather than direction, both GXYLT1-to-partner and partner-to-GXYLT1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ASNS grouped by GXYLT1-low versus GXYLT1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GXYLT1→partner) and Y-score (partner→GXYLT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECASNS →+0.428+1.415.001.04632
UCEC14-3-3_beta →-0.109-2.673.003.00531
UCECEGFR_pY1068 →-0.240-1.700.010.04231
UCECA-Raf_pS299 →-0.128-3.169.004.01831
UCECG6PD →-0.285-3.156.018.01831
UCECAcetyl-a-Tubulin-Lys40 →+0.564+2.169.003.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 32 associations by consensus.

ASNS by GXYLT1 expression — UCEC

Box plot of ASNS in GXYLT1-low vs GXYLT1-high samples in UCEC.

Explore this box plot interactively →

Exploration