GUCY2F

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GUCY2F mutation is significantly associated with the RNA expression of many other genes, with 204 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible GUCY2F-associated genes across cancer lineages are FAM86B2, FAM86B1, and GML. Each is linked with GUCY2F in more than 1 cancer types. Because this analysis shows association rather than direction, both GUCY2F-to-partner and partner-to-GUCY2F results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FAM86B2 grouped by GUCY2F-low versus GUCY2F-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GUCY2F→partner) and Y-score (partner→GUCY2F) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEFAM86B2 →+0.783+3.502.001.00132
LARGE_INTESTINEFAM86B1 →+1.050+3.502.001.00132
BLOOD_LeukemiaGML →+0.080+4.152<.001.00931
BLOOD_LeukemiaCALHM4 →+0.019+5.269.004<.00131
BLOOD_LeukemiaNKX2-6 →+0.489+5.786<.001<.00131
BLOOD_LeukemiaOR1G1 →+0.083+4.705<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 204 associations by consensus.

FAM86B2 by GUCY2F expression — LARGE_INTESTINE

Box plot of FAM86B2 in GUCY2F-low vs GUCY2F-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration