GTF2IP9

Across TCGA patient cohorts, GTF2IP9 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,155 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible GTF2IP9-associated GO terms across cancer lineages are Positive regulation of chromosome organization, Regulation of mRNA splicing, via spliceosome, and mRNA transport. Each is linked with GTF2IP9 in more than 32 cancer types. Because this analysis shows association rather than direction, both GTF2IP9-to-partner and partner-to-GTF2IP9 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of chromosome organization grouped by GTF2IP9-low versus GTF2IP9-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GTF2IP9→partner) and Y-score (partner→GTF2IP9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Positive regulation of chromosome organization →	+0.065	+0.745	<.001	<.001	3	33
STAD	Regulation of mRNA splicing, via spliceosome →	+0.066	+0.653	<.001	<.001	3	33
STAD	mRNA transport →	+0.063	+0.688	<.001	<.001	3	33
DLBC	RNA polymerase II preinitiation complex assembly →	+0.054	+0.636	<.001	<.001	3	33
STAD	Establishment of RNA localization →	+0.065	+0.695	<.001	<.001	3	33
THYM	Obsolete histone H3-K4 methylation →	+0.087	+0.949	<.001	<.001	3	33

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,155 associations by consensus.

Positive regulation of chromosome organization by GTF2IP9 expression — STAD

Explore this box plot interactively →