GTF2H4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GTF2H4 mutation is significantly associated with the total protein of many other genes, with 18 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GTF2H4-associated genes across cancer lineages are eEF2, A-Raf_pS299, and JNK_pT183_Y185. Each is linked with GTF2H4 in more than 1 cancer types. Because this analysis shows association rather than direction, both GTF2H4-to-partner and partner-to-GTF2H4 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GTF2H4→partner) and Y-score (partner→GTF2H4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeEF2 →+0.419+2.321.019.03532
UCECA-Raf_pS299 →-0.160-2.999.007.03531
UCECJNK_pT183_Y185 →-0.180-3.446.033.00531
UCECJNK2 →+0.345+2.321<.001.03531
UCECKu80 →+0.318+3.472.007.00231
UCECMEK1 →+0.508+3.169.005.01931
Each partner links to its Q-omics profile. Showing the 6 strongest of 18 associations by consensus.

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