GTDC1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GTDC1 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,262 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible GTDC1-associated GO terms across cancer lineages are Primary alcohol metabolic process, Regulation of G1/S transition of mitotic cell cycle, and Transcription initiation at RNA polymerase II promoter. Each is linked with GTDC1 in more than 8 cancer types. Because this analysis shows association rather than direction, both GTDC1-to-partner and partner-to-GTDC1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Primary alcohol metabolic process grouped by GTDC1-low versus GTDC1-high in LUNG_NSCLC_LUAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GTDC1→partner) and Y-score (partner→GTDC1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADPrimary alcohol metabolic process →-0.077-0.513.008.00139
SKINRegulation of G1/S transition of mitotic cell cycle →+0.064+0.567<.001.00339
LARGE_INTESTINETranscription initiation at RNA polymerase II promoter →+0.048+0.546<.001<.00139
LARGE_INTESTINEEndosomal transport →+0.046+0.547<.001.00138
KIDNEYPositive regulation of lamellipodium assembly →+0.128+0.949.003.00838
SOFT_TISSUEMitochondrial electron transport, cytochrome c to oxygen →+0.064+0.929.004.00238
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,262 associations by consensus.

Primary alcohol metabolic process by GTDC1 expression — LUNG_NSCLC_LUAD

Box plot of Primary alcohol metabolic process in GTDC1-low vs GTDC1-high samples in LUNG_NSCLC_LUAD.

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Exploration