GSR

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GSR mutation is significantly associated with the total protein of many other genes, with 27 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GSR-associated genes across cancer lineages are Ku80, eIF4G, and FASN. Each is linked with GSR in more than 1 cancer types. Because this analysis shows association rather than direction, both GSR-to-partner and partner-to-GSR results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Ku80 grouped by GSR-low versus GSR-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GSR→partner) and Y-score (partner→GSR) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECKu80 →+0.209+1.375.012.02432
UCECeIF4G →+0.216+1.807.048.02531
UCECFASN →+0.397+2.321.004.03331
UCECFOXO3a_pS318_S321 →-0.093-1.896.035.01531
UCECACC_pS79 →+0.282+2.000.021.02931
UCECACC1 →+0.333+3.472.009.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 27 associations by consensus.

Ku80 by GSR expression — UCEC

Box plot of Ku80 in GSR-low vs GSR-high samples in UCEC.

Explore this box plot interactively →

Exploration