GSPT1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GSPT1 mutation is significantly associated with the total protein of many other genes, with 7 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GSPT1-associated genes across cancer lineages are Ku80, p38-MAPK_pT180_Y182, and Src_pY416. Each is linked with GSPT1 in more than 1 cancer types. Because this analysis shows association rather than direction, both GSPT1-to-partner and partner-to-GSPT1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Ku80 grouped by GSPT1-low versus GSPT1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GSPT1→partner) and Y-score (partner→GSPT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECKu80 →+0.294+3.335.017.00531
UCECp38-MAPK_pT180_Y182 →-0.573-3.308.015.01031
UCECSrc_pY416 →-0.261-3.308.039.01031
UCECCyclin-E2 →+0.182+2.817.039.03631
UCECFoxM1 →+0.346+3.321.010.01021
UCECPCNA →+0.310+3.321.006.01011
Each partner links to its Q-omics profile. Showing the 6 strongest of 7 associations by consensus.

Ku80 by GSPT1 expression — UCEC

Box plot of Ku80 in GSPT1-low vs GSPT1-high samples in UCEC.

Explore this box plot interactively →

Exploration