GSG1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GSG1 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,401 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GSG1-associated proteins across cancer lineages are TCIRG1, MLKL, and ZFR. Each is linked with GSG1 in more than 3 cancer types. Because this analysis shows association rather than direction, both GSG1-to-partner and partner-to-GSG1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GSG1 versus TCIRG1 in GBM, with a Pearson correlation of -0.32.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GSG1→partner) and Y-score (partner→GSG1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMTCIRG1 →-0.441-0.265.001.00534
GBMMLKL →-0.441-0.289.003.00634
HNSCZFR →+0.239+0.468<.001.00234
GBMCBX8 →+0.430+0.426.002<.00134
LSCCDDX47 →+0.371+0.320<.001<.00134
HNSCMSI2 →+0.446+0.442<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,401 associations by consensus.

GSG1 vs TCIRG1 — GBM

Per-sample scatter of GSG1 vs TCIRG1 in GBM (Pearson r = -0.32).

Explore this scatter interactively →

Exploration