GRTP1

Across TCGA patient cohorts, GRTP1 protein abundance is significantly associated with the RNA expression of many other genes, with 9,062 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible GRTP1-associated genes across cancer lineages are GRTP1-AS1, LDHD, and CUL4A. Each is linked with GRTP1 in more than 4 cancer types. Because this analysis shows association rather than direction, both GRTP1-to-partner and partner-to-GRTP1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GRTP1 versus GRTP1-AS1 in LSCC, with a Pearson correlation of 0.66.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GRTP1→partner) and Y-score (partner→GRTP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	GRTP1-AS1 →	+0.741	+0.481	<.001	<.001	3	5
UCEC	LDHD →	+1.084	+0.305	.001	.004	3	4
LSCC	CUL4A →	+0.755	+0.546	<.001	.001	3	4
BRCA	KCNJ3 →	+1.417	+0.558	.001	<.001	3	3
BRCA	PRRT1B →	+1.083	+0.659	<.001	<.001	3	3
COAD	FABP5 →	-1.244	-0.496	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,062 associations by consensus.

GRTP1 vs GRTP1-AS1 — LSCC

Explore this scatter interactively →