GRTP1-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, GRTP1-AS1 RNA differs between tumor and matched normal tissue in 10 of 18 cancer types tested, making tumor–normal expression one of GRTP1-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in thyroid carcinoma (THCA), where GRTP1-AS1 RNA is repressed in tumor relative to normal tissue. In most cancer types GRTP1-AS1 is over-expressed in tumor, although a few such as THCA and LUAD show the opposite, repressed pattern.

THCA, LUAD, and COAD are the cancer types where GRTP1-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in GRTP1-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
THCAAllAll−0.129.0018view →
LUADFemaleIII,IV−0.936<.0017view →
COADAllIV+0.822.0076view →
UCECAllAll−0.656<.0016view →
KICHAllAll−0.240<.0015view →
STADAllII,III,IV+0.287.0174view →
BRCAAllII,III,IV+0.168.0284view →
READFemaleAll+0.712.0172view →
LUSCMaleAll−0.327.0121view →
KIRPAllAll−0.152.0231view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 10 strongest of 10 lineages.

Exploration