GRPEL1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GRPEL1 mutation is significantly associated with the total protein of many other genes, with 4 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GRPEL1-associated genes across cancer lineages are VHL, ATM, and NF-kB-p65_pS536. Each is linked with GRPEL1 in more than 1 cancer types. Because this analysis shows association rather than direction, both GRPEL1-to-partner and partner-to-GRPEL1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, VHL grouped by GRPEL1-low versus GRPEL1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GRPEL1→partner) and Y-score (partner→GRPEL1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECVHL →-1.083-3.169.003.02031
UCECATM →-0.523-3.169.035.02031
UCECNF-kB-p65_pS536 →-0.565-2.990.023.03621
UCECc-Kit →-0.252-3.169.049.02021
Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

VHL by GRPEL1 expression — UCEC

Box plot of VHL in GRPEL1-low vs GRPEL1-high samples in UCEC.

Explore this box plot interactively →

Exploration