GRN

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GRN RNA expression is significantly associated with the protein abundance of many other proteins, with 14,220 significant associations in total. GBM shows the largest number of these associations.

The most reproducible GRN-associated proteins across cancer lineages are APOBR, STAT2, and CTSS. Each is linked with GRN in more than 6 cancer types. Because this analysis shows association rather than direction, both GRN-to-partner and partner-to-GRN results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GRN versus APOBR in BRCA, with a Pearson correlation of 0.39.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GRN→partner) and Y-score (partner→GRN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAAPOBR →+0.595+0.887<.001<.00137
GBMSTAT2 →+0.589+0.758<.001<.00136
GBMCTSS →+0.743+0.792<.001<.00136
PDACTYROBP →+0.767+0.323<.001<.00136
GBMSKAP2 →+0.726+0.696<.001<.00135
OVSPN →+0.786+1.231.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,220 associations by consensus.

GRN vs APOBR — BRCA

Per-sample scatter of GRN vs APOBR in BRCA (Pearson r = 0.39).

Explore this scatter interactively →

Exploration