GRIK1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GRIK1 mutation is significantly associated with the total protein of many other genes, with 51 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GRIK1-associated genes across cancer lineages are PDCD4, ATM, and 4E-BP1. Each is linked with GRIK1 in more than 3 cancer types. Because this analysis shows association rather than direction, both GRIK1-to-partner and partner-to-GRIK1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PDCD4 grouped by GRIK1-low versus GRIK1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GRIK1→partner) and Y-score (partner→GRIK1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPDCD4 →-0.384-1.222.004.01133
UCECATM →-0.607-2.000<.001<.00133
UCEC4E-BP1 →+0.262+3.906<.001<.00133
LUSCCyclin-B1 →+0.508+2.816.040.03614
LUADHeregulin →-0.122-3.000.046.03532
LUADMSH6 →+0.353+2.824.007.03432
Each partner links to its Q-omics profile. Showing the 6 strongest of 51 associations by consensus.

PDCD4 by GRIK1 expression — UCEC

Box plot of PDCD4 in GRIK1-low vs GRIK1-high samples in UCEC.

Explore this box plot interactively →

Exploration