GRIA2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GRIA2 protein abundance is significantly associated with the RNA expression of many other genes, with 7,174 significant associations in total. GBM shows the largest number of these associations.

The most reproducible GRIA2-associated genes across cancer lineages are MIR4786, B9D1, and SUDS3. Each is linked with GRIA2 in more than 1 cancer types. Because this analysis shows association rather than direction, both GRIA2-to-partner and partner-to-GRIA2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GRIA2 versus MIR4786 in UCEC, with a Pearson correlation of 0.55.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GRIA2→partner) and Y-score (partner→GRIA2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMIR4786 →+2.121+0.797.002.00332
BRCAB9D1 →+1.527+0.906.006<.00132
BRCASUDS3 →+0.696+0.906.001<.00132
BRCASLC41A3 →+0.704+0.906.005<.00132
BRCAGRK4 →+0.830+0.906.004<.00132
GBMGAL3ST1 →+1.008+0.611<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,174 associations by consensus.

GRIA2 vs MIR4786 — UCEC

Per-sample scatter of GRIA2 vs MIR4786 in UCEC (Pearson r = 0.55).

Explore this scatter interactively →

Exploration