GREM1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GREM1 mutation is significantly associated with the total protein of many other genes, with 44 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GREM1-associated genes across cancer lineages are ATM, eEF2, and A-Raf_pS299. Each is linked with GREM1 in more than 1 cancer types. Because this analysis shows association rather than direction, both GREM1-to-partner and partner-to-GREM1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ATM grouped by GREM1-low versus GREM1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GREM1→partner) and Y-score (partner→GREM1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECATM →-0.512-2.209.001.00932
UCECeEF2 →+0.353+3.459.004.00531
UCECA-Raf_pS299 →-0.163-3.700<.001.00131
UCECFoxM1 →+0.218+1.440.015.02431
UCECFOXO3a_pS318_S321 →-0.131-2.077.002.00531
UCECGAPDH →+0.399+1.584.032.03231
Each partner links to its Q-omics profile. Showing the 6 strongest of 44 associations by consensus.

ATM by GREM1 expression — UCEC

Box plot of ATM in GREM1-low vs GREM1-high samples in UCEC.

Explore this box plot interactively →

Exploration