Across TCGA patient cohorts, GPSM3 protein abundance is significantly associated with the RNA expression of many other genes, with 19,607 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GPSM3-associated genes across cancer lineages are NCF4, CSF2RB, and IL2RB. Each is linked with GPSM3 in more than 9 cancer types. Because this analysis shows association rather than direction, both GPSM3-to-partner and partner-to-GPSM3 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GPSM3→partner) and Y-score (partner→GPSM3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	NCF4 →	+1.407	+0.802	<.001	<.001	3	10
GBM	CSF2RB →	+1.319	+0.819	<.001	<.001	3	10
OV	IL2RB →	+1.198	+0.645	<.001	<.001	3	10
GBM	TLR8 →	+1.343	+0.706	<.001	<.001	3	10
BRCA	CORO1A →	+1.416	+0.552	<.001	<.001	3	10
HNSC	LYL1 →	+0.789	+0.374	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 19,607 associations by consensus.

Exploration

GPSM3 survival (RNA) · tumor vs normal (RNA) · all GPSM3 data types