Across TCGA patient cohorts, GPSM3 protein abundance is significantly associated with the protein abundance of many other proteins, with 24,885 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GPSM3-associated proteins across cancer lineages are ADA2, CCDC88B, and CCDC88B_S597. Each is linked with GPSM3 in more than 9 cancer types. Because this analysis shows association rather than direction, both GPSM3-to-partner and partner-to-GPSM3 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GPSM3→partner) and Y-score (partner→GPSM3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	ADA2 →	+0.666	+0.650	<.001	<.001	3	10
COAD	CCDC88B →	+0.786	+0.660	.001	<.001	3	10
OV	CCDC88B_S597 →	+1.223	+0.944	<.001	<.001	3	10
GBM	AMPD3 →	+0.869	+0.753	<.001	<.001	3	10
HNSC	ANKRD44 →	+0.568	+0.663	<.001	<.001	3	10
UCEC	APBB1IP →	+0.811	+0.799	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 24,885 associations by consensus.

Exploration

GPSM3 survival (RNA) · tumor vs normal (RNA) · all GPSM3 data types