Across TCGA patient cohorts, GPSM3 mutation is significantly associated with the RNA expression of many other genes, with 126 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible GPSM3-associated genes across cancer lineages are RNU6-1052P, RNU6-492P, and RNU6-340P. Each is linked with GPSM3 in more than 2 cancer types. Because this analysis shows association rather than direction, both GPSM3-to-partner and partner-to-GPSM3 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GPSM3→partner) and Y-score (partner→GPSM3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	RNU6-1052P →	+0.288	+7.954	<.001	.008	3	3
HNSC	RNU6-492P →	+0.478	+7.954	<.001	.008	3	2
STAD	RNU6-340P →	+0.686	+4.139	.001	.004	3	2
STAD	RNU6-867P →	+0.621	+3.736	<.001	.008	3	2
STAD	RNU2-3P →	+0.323	+4.195	.003	.004	3	2
STAD	UBE2V1P10 →	+0.159	+3.929	.006	.005	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 126 associations by consensus.

Exploration

GPSM3 survival (RNA) · tumor vs normal (RNA) · all GPSM3 data types