GPSM1

Across TCGA patient cohorts, GPSM1 protein abundance is significantly associated with the RNA expression of many other genes, with 14,040 significant associations in total. GBM shows the largest number of these associations.

The most reproducible GPSM1-associated genes across cancer lineages are TSHZ3, PXDN, and COL5A1. Each is linked with GPSM1 in more than 4 cancer types. Because this analysis shows association rather than direction, both GPSM1-to-partner and partner-to-GPSM1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GPSM1 versus TSHZ3 in LSCC, with a Pearson correlation of 0.39.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GPSM1→partner) and Y-score (partner→GPSM1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	TSHZ3 →	+0.839	+0.374	<.001	<.001	3	5
UCEC	PXDN →	+1.313	+0.332	<.001	<.001	3	5
CCRCC	COL5A1 →	+1.582	+0.354	<.001	<.001	3	5
HNSC	POSTN →	+1.293	+0.309	.001	.001	3	5
UCEC	SHISAL1 →	+1.109	+0.297	<.001	<.001	3	5
LSCC	COL6A1 →	+1.164	+0.292	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,040 associations by consensus.

GPSM1 vs TSHZ3 — LSCC

Explore this scatter interactively →