GPRC6A

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GPRC6A mutation is significantly associated with the RNA expression of many other genes, with 5,914 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible GPRC6A-associated genes across cancer lineages are AATF, RNU6-768P, and DLAT. Each is linked with GPRC6A in more than 2 cancer types. Because this analysis shows association rather than direction, both GPRC6A-to-partner and partner-to-GPRC6A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, AATF grouped by GPRC6A-low versus GPRC6A-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GPRC6A→partner) and Y-score (partner→GPRC6A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECAATF →+0.324+1.678.001<.00133
BLCARNU6-768P →+0.742+4.492<.001.00533
UCECDLAT →+0.431+1.678.001<.00133
SKCMCENPU →+0.579+1.478<.001<.00133
UCECSKA1 →+0.636+3.269<.001<.00133
UCECEME1 →+0.466+1.688<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,914 associations by consensus.

AATF by GPRC6A expression — UCEC

Box plot of AATF in GPRC6A-low vs GPRC6A-high samples in UCEC.

Explore this box plot interactively →

Exploration