GPRC5B

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GPRC5B mutation is significantly associated with the RNA expression of many other genes, with 3,130 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GPRC5B-associated genes across cancer lineages are CHUK, C18orf25, and RIC8A. Each is linked with GPRC5B in more than 3 cancer types. Because this analysis shows association rather than direction, both GPRC5B-to-partner and partner-to-GPRC5B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CHUK grouped by GPRC5B-low versus GPRC5B-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GPRC5B→partner) and Y-score (partner→GPRC5B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMCHUK →+0.572+2.719.006.00334
UCECC18orf25 →+0.409+3.470.002.00234
SKCMRIC8A →+0.396+2.732.003.00333
UCECERCC6L →+0.693+3.010<.001<.00133
SKCMFANCE →+0.491+2.719.009.00333
UCECSRSF4 →+0.482+3.058<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,130 associations by consensus.

CHUK by GPRC5B expression — SKCM

Box plot of CHUK in GPRC5B-low vs GPRC5B-high samples in SKCM.

Explore this box plot interactively →

Exploration