GPR153

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GPR153 mutation is significantly associated with the RNA expression of many other genes, with 377 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GPR153-associated genes across cancer lineages are LINC02297, MIR4441, and RN7SL736P. Each is linked with GPR153 in more than 1 cancer types. Because this analysis shows association rather than direction, both GPR153-to-partner and partner-to-GPR153 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LINC02297 grouped by GPR153-low versus GPR153-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GPR153→partner) and Y-score (partner→GPR153) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCALINC02297 →+0.076+5.251<.001.00632
SKCMMIR4441 →+0.243+5.163<.001.00232
SKCMRN7SL736P →+0.245+3.333<.001.00431
SKCMMIR6074 →+0.259+4.897<.001.00231
SKCMDDX6P2 →+0.037+3.123.004.00731
UCECIGHV3OR16-8 →+0.898+2.650<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 377 associations by consensus.

LINC02297 by GPR153 expression — BLCA

Box plot of LINC02297 in GPR153-low vs GPR153-high samples in BLCA.

Explore this box plot interactively →

Exploration