GPM6BP2

Across TCGA patient cohorts, GPM6BP2 RNA expression is significantly associated with the mutation status of many other genes, with 26 significant associations in total. STAD shows the largest number of these associations.

The most reproducible GPM6BP2-associated genes across cancer lineages are SUPT6H, TK1, and FGF12. Each is linked with GPM6BP2 in more than 1 cancer types. Because this analysis shows association rather than direction, both GPM6BP2-to-partner and partner-to-GPM6BP2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SUPT6H grouped by GPM6BP2-low versus GPM6BP2-high in THCA.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GPM6BP2→partner) and Y-score (partner→GPM6BP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
THCA	SUPT6H →	+7.962	+0.249	.007	<.001	3	1
THCA	TK1 →	+7.962	+0.249	.007	<.001	3	1
STAD	FGF12 →	+5.837	+0.119	<.001	<.001	3	1
STAD	KIF21B →	+4.136	+0.040	.005	<.001	3	1
STAD	NXF5 →	+4.667	+0.055	.002	<.001	3	1
STAD	MAP7D3 →	+5.252	+0.076	.001	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 26 associations by consensus.

SUPT6H by GPM6BP2 expression — THCA

Explore this box plot interactively →