GPKOW

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GPKOW RNA expression is significantly associated with the go_rna of many other GO terms, with 3,064 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible GPKOW-associated GO terms across cancer lineages are Growth hormone secretion, Type 2 mitophagy, and Regulation of autophagosome maturation. Each is linked with GPKOW in more than 15 cancer types. Because this analysis shows association rather than direction, both GPKOW-to-partner and partner-to-GPKOW results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Growth hormone secretion grouped by GPKOW-low versus GPKOW-high in LUNG_NSCLC_LUSC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GPKOW→partner) and Y-score (partner→GPKOW) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUSCGrowth hormone secretion →+0.144+0.984.003<.001316
LIVERType 2 mitophagy →+0.200+0.780<.001<.001313
LARGE_INTESTINERegulation of autophagosome maturation →+0.095+0.624<.001<.001312
BREASTRegulation of heterochromatin formation →+0.090+1.147.003<.001312
LARGE_INTESTINERegulation of protein sumoylation →+0.093+0.462.003.004311
UPPER_AERODIGESTIVE_TRACTRegulation of heterochromatin organization →+0.080+0.617.001<.001311
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,064 associations by consensus.

Growth hormone secretion by GPKOW expression — LUNG_NSCLC_LUSC

Box plot of Growth hormone secretion in GPKOW-low vs GPKOW-high samples in LUNG_NSCLC_LUSC.

Explore this box plot interactively →

Exploration