GPCPD1

Across TCGA patient cohorts, GPCPD1 protein abundance is significantly associated with the RNA expression of many other genes, with 13,336 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GPCPD1-associated genes across cancer lineages are EIF4EP1, OSCAR, and SEC24D. Each is linked with GPCPD1 in more than 8 cancer types. Because this analysis shows association rather than direction, both GPCPD1-to-partner and partner-to-GPCPD1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GPCPD1 versus EIF4EP1 in UCEC, with a Pearson correlation of 0.69.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GPCPD1→partner) and Y-score (partner→GPCPD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	EIF4EP1 →	+1.507	+0.696	<.001	<.001	3	9
CCRCC	OSCAR →	+0.681	+0.198	<.001	.001	3	5
BRCA	SEC24D →	+0.581	+0.294	.003	<.001	3	5
COAD	SHLD1 →	+0.659	+0.429	<.001	<.001	3	5
CCRCC	APOBR →	+0.598	+0.161	<.001	<.001	3	5
CCRCC	CNN2 →	+0.725	+0.195	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,336 associations by consensus.

GPCPD1 vs EIF4EP1 — UCEC

Explore this scatter interactively →