GPBP1L1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GPBP1L1 protein abundance is significantly associated with the RNA expression of many other genes, with 4,933 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible GPBP1L1-associated genes across cancer lineages are FXYD2, RPS12P16, and OTUD1. Each is linked with GPBP1L1 in more than 2 cancer types. Because this analysis shows association rather than direction, both GPBP1L1-to-partner and partner-to-GPBP1L1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GPBP1L1 versus FXYD2 in GBM, with a Pearson correlation of -0.68.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GPBP1L1→partner) and Y-score (partner→GPBP1L1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMFXYD2 →-0.975-0.386.007.00333
GBMRPS12P16 →-0.885-0.377.003.00433
OVOTUD1 →-0.715-0.983.002.00332
LSCCAKR1C5P →-0.870-0.145.005.00932
LSCCH3C11 →+1.031+0.163<.001<.00132
LSCCSS18L2P1 →-0.240-0.171.008<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,933 associations by consensus.

GPBP1L1 vs FXYD2 — GBM

Per-sample scatter of GPBP1L1 vs FXYD2 in GBM (Pearson r = -0.68).

Explore this scatter interactively →

Exploration