GPATCH2

Across TCGA patient cohorts, GPATCH2 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,077 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GPATCH2-associated proteins across cancer lineages are RPRD2, GATAD2B, and PARP1. Each is linked with GPATCH2 in more than 6 cancer types. Because this analysis shows association rather than direction, both GPATCH2-to-partner and partner-to-GPATCH2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GPATCH2 versus RPRD2 in COAD, with a Pearson correlation of 0.36.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GPATCH2→partner) and Y-score (partner→GPATCH2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	RPRD2 →	+0.270	+0.310	.001	.003	3	7
HNSC	GATAD2B →	+0.304	+0.648	<.001	<.001	3	7
HNSC	PARP1 →	+0.370	+0.402	<.001	<.001	3	7
GBM	ARID4B →	+0.256	+0.370	<.001	<.001	3	6
BRCA	RCOR3 →	+0.413	+0.582	<.001	.001	3	6
UCEC	BROX →	+0.582	+0.515	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,077 associations by consensus.

GPATCH2 vs RPRD2 — COAD

Explore this scatter interactively →