GPATCH2

Across TCGA patient cohorts, GPATCH2 protein abundance is significantly associated with the RNA expression of many other genes, with 7,829 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GPATCH2-associated genes across cancer lineages are C1orf226, RRP15, and EEF1AKNMT. Each is linked with GPATCH2 in more than 4 cancer types. Because this analysis shows association rather than direction, both GPATCH2-to-partner and partner-to-GPATCH2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GPATCH2 versus C1orf226 in BRCA, with a Pearson correlation of 0.37.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GPATCH2→partner) and Y-score (partner→GPATCH2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	C1orf226 →	+1.450	+0.352	<.001	.002	3	5
GBM	RRP15 →	+0.461	+0.211	.001	.002	3	5
UCEC	EEF1AKNMT →	+1.070	+0.241	.001	.008	3	4
UCEC	ABCB10 →	+0.583	+0.188	.002	.008	3	4
LSCC	ENSA →	+0.537	+0.337	<.001	<.001	3	4
LSCC	UBAP2L →	+0.437	+0.238	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,829 associations by consensus.

GPATCH2 vs C1orf226 — BRCA

Explore this scatter interactively →