GOPC

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GOPC RNA expression is significantly associated with the protein abundance of many other proteins, with 11,502 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible GOPC-associated proteins across cancer lineages are GPX7, PPIF, and PPIL4. Each is linked with GOPC in more than 4 cancer types. Because this analysis shows association rather than direction, both GOPC-to-partner and partner-to-GOPC results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GOPC versus GPX7 in OV, with a Pearson correlation of 0.35.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GOPC→partner) and Y-score (partner→GOPC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVGPX7 →+0.579+0.524.002.00135
OVPPIF →-0.521-0.553.005.00335
LSCCPPIL4 →+0.207+0.352<.001<.00135
GBMARID1B →+0.187+0.467<.001<.00135
BRCAC1QTNF5 →+0.628+0.417.001.00134
BRCACOL5A2 →+0.639+0.384<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,502 associations by consensus.

GOPC vs GPX7 — OV

Per-sample scatter of GOPC vs GPX7 in OV (Pearson r = 0.35).

Explore this scatter interactively →

Exploration