GOLGA3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GOLGA3 protein abundance is significantly associated with the RNA expression of many other genes, with 13,496 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GOLGA3-associated genes across cancer lineages are FCF1, SNHG20, and SNW1. Each is linked with GOLGA3 in more than 3 cancer types. Because this analysis shows association rather than direction, both GOLGA3-to-partner and partner-to-GOLGA3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GOLGA3 versus FCF1 in UCEC, with a Pearson correlation of -0.37.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GOLGA3→partner) and Y-score (partner→GOLGA3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECFCF1 →-0.372-0.214<.001<.00134
COADSNHG20 →-0.426-0.170<.001.00334
LSCCSNW1 →-0.618-0.265<.001<.00134
HNSCWRNIP1 →-0.858-0.168.002<.00134
HNSCLINC01735 →+0.717+0.173.001.00134
HNSCGTF3C5 →-0.730-0.145.002.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,496 associations by consensus.

GOLGA3 vs FCF1 — UCEC

Per-sample scatter of GOLGA3 vs FCF1 in UCEC (Pearson r = -0.37).

Explore this scatter interactively →

Exploration