GNPDA2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GNPDA2 protein abundance is significantly associated with the protein abundance of many other proteins, with 27,033 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible GNPDA2-associated proteins across cancer lineages are SEPTIN2, SEPTIN7, and SETD7. Each is linked with GNPDA2 in more than 9 cancer types. Because this analysis shows association rather than direction, both GNPDA2-to-partner and partner-to-GNPDA2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GNPDA2 versus SEPTIN2 in PDAC, with a Pearson correlation of 0.67.

protein abundance associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GNPDA2→partner) and Y-score (partner→GNPDA2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACSEPTIN2 →+0.305+0.331<.001<.00139
PDACSEPTIN7 →+0.332+0.350<.001<.00139
UCECSETD7 →+0.591+0.423<.001<.00139
LUADSRPK1 →-0.370-0.250<.001<.00139
UCECYME1L1 →-0.405-0.343<.001<.00139
LUADZC3H14_S620 →-1.048-0.217<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 27,033 associations by consensus.

GNPDA2 vs SEPTIN2 — PDAC

Per-sample scatter of GNPDA2 vs SEPTIN2 in PDAC (Pearson r = 0.67).

Explore this scatter interactively →

Exploration