GNPAT

Across TCGA patient cohorts, GNPAT RNA expression is significantly associated with the protein abundance of many other proteins, with 14,872 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GNPAT-associated proteins across cancer lineages are PARP1, C1orf35, and BROX. Each is linked with GNPAT in more than 8 cancer types. Because this analysis shows association rather than direction, both GNPAT-to-partner and partner-to-GNPAT results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GNPAT versus PARP1 in HNSC, with a Pearson correlation of 0.39.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GNPAT→partner) and Y-score (partner→GNPAT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	PARP1 →	+0.441	+0.653	<.001	<.001	3	9
BRCA	C1orf35 →	+0.523	+0.478	<.001	<.001	3	8
OV	BROX →	+0.699	+0.520	<.001	<.001	3	8
BRCA	PRCC →	+0.280	+0.408	<.001	<.001	3	7
HNSC	ARID4B →	+0.342	+1.006	<.001	<.001	3	7
OV	BPNT1 →	+0.575	+0.556	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,872 associations by consensus.

GNPAT vs PARP1 — HNSC

Explore this scatter interactively →