GNL1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GNL1 mutation is significantly associated with the total protein of many other genes, with 12 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GNL1-associated genes across cancer lineages are FoxM1, Acetyl-a-Tubulin-Lys40, and PDCD4. Each is linked with GNL1 in more than 1 cancer types. Because this analysis shows association rather than direction, both GNL1-to-partner and partner-to-GNL1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GNL1→partner) and Y-score (partner→GNL1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECFoxM1 →+0.259+2.321.046.03531
UCECAcetyl-a-Tubulin-Lys40 →+0.600+2.321.018.03531
UCECPDCD4 →-0.594-3.459.011.00531
UCECSTAT3_pY705 →-0.457-3.459<.001.00531
UCECBcl-2 →-0.351-2.295.044.03631
UCECACC_pS79 →+0.534+2.817.002.03621
Each partner links to its Q-omics profile. Showing the 6 strongest of 12 associations by consensus.

Exploration