GNG4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GNG4 mutation is significantly associated with the total protein of many other genes, with 9 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GNG4-associated genes across cancer lineages are Ku80, mTOR, and NDRG1_pT346. Each is linked with GNG4 in more than 1 cancer types. Because this analysis shows association rather than direction, both GNG4-to-partner and partner-to-GNG4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Ku80 grouped by GNG4-low versus GNG4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GNG4→partner) and Y-score (partner→GNG4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECKu80 →+0.291+2.817.024.03631
UCECmTOR →-0.216-3.169.014.02031
UCECNDRG1_pT346 →-0.559-3.169.038.02031
UCECPaxillin →+0.412+3.009.003.01931
UCECYB-1_pS102 →-0.221-3.169.030.02031
UCECCyclin-B1 →+0.628+3.169.041.02031
Each partner links to its Q-omics profile. Showing the 6 strongest of 9 associations by consensus.

Ku80 by GNG4 expression — UCEC

Box plot of Ku80 in GNG4-low vs GNG4-high samples in UCEC.

Explore this box plot interactively →

Exploration