GNB3

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GNB3 mutation is significantly associated with the total protein of many other genes, with 15 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GNB3-associated genes across cancer lineages are eIF4E, JNK_pT183_Y185, and JNK2. Each is linked with GNB3 in more than 1 cancer types. Because this analysis shows association rather than direction, both GNB3-to-partner and partner-to-GNB3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eIF4E grouped by GNB3-low versus GNB3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GNB3→partner) and Y-score (partner→GNB3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeIF4E →+0.224+2.584.022.01131
UCECJNK_pT183_Y185 →-0.235-3.321.002.01031
UCECJNK2 →+0.250+3.009.006.01931
UCECKu80 →+0.384+2.598<.001.00631
UCECNotch1 →+0.184+2.817.005.03631
UCECP-Cadherin →-0.154-3.159.021.01931
Each partner links to its Q-omics profile. Showing the 6 strongest of 15 associations by consensus.

eIF4E by GNB3 expression — UCEC

Box plot of eIF4E in GNB3-low vs GNB3-high samples in UCEC.

Explore this box plot interactively →

Exploration