Across TCGA patient cohorts, GNAT3 protein abundance is significantly associated with the RNA expression of many other genes, with 991 significant associations in total. GBM shows the largest number of these associations.

The most reproducible GNAT3-associated genes across cancer lineages are TOR4A, MEFV, and CHIC2. Each is linked with GNAT3 in more than 1 cancer types. Because this analysis shows association rather than direction, both GNAT3-to-partner and partner-to-GNAT3 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GNAT3→partner) and Y-score (partner→GNAT3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	TOR4A →	+0.625	+0.948	<.001	.001	3	2
BRCA	MEFV →	+0.369	+0.766	.009	.003	3	1
BRCA	CHIC2 →	+0.501	+1.155	<.001	.007	3	1
BRCA	CHD5 →	-0.504	-1.087	.008	.008	3	1
BRCA	B4GALT2 →	+0.696	+1.214	.008	.002	3	1
BRCA	FAM78A →	+0.862	+0.864	<.001	.004	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 991 associations by consensus.

Exploration

GNAT3 survival (RNA) · tumor vs normal (RNA) · all GNAT3 data types