GNAT2

Across TCGA cell cohorts, GNAT2 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,023 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible GNAT2-associated GO terms across cancer lineages are IMP salvage, Response to light intensity, and Mitotic spindle midzone assembly. Each is linked with GNAT2 in more than 9 cancer types. Because this analysis shows association rather than direction, both GNAT2-to-partner and partner-to-GNAT2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, IMP salvage grouped by GNAT2-low versus GNAT2-high in SKIN.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GNAT2→partner) and Y-score (partner→GNAT2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKIN	IMP salvage →	+0.175	+0.333	<.001	<.001	3	10
BLOOD_Lymphoma	Response to light intensity →	-0.112	-0.370	<.001	<.001	3	10
OVARY	Mitotic spindle midzone assembly →	+0.218	+0.251	<.001	.001	3	7
LARGE_INTESTINE	GMP biosynthetic process →	+0.120	+0.328	<.001	<.001	3	7
LARGE_INTESTINE	IMP biosynthetic process →	+0.176	+0.284	<.001	<.001	2	8
OVARY	Mitotic spindle elongation →	+0.218	+0.251	<.001	.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,023 associations by consensus.

IMP salvage by GNAT2 expression — SKIN

Explore this box plot interactively →