GNAQ

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GNAQ protein abundance is significantly associated with the RNA expression of many other genes, with 9,311 significant associations in total. GBM shows the largest number of these associations.

The most reproducible GNAQ-associated genes across cancer lineages are GNA14, DUSP4, and CIP2A. Each is linked with GNAQ in more than 5 cancer types. Because this analysis shows association rather than direction, both GNAQ-to-partner and partner-to-GNAQ results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GNAQ versus GNA14 in BRCA, with a Pearson correlation of 0.27.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GNAQ→partner) and Y-score (partner→GNAQ) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAGNA14 →+0.953+0.264<.001.00436
BRCADUSP4 →+1.472+0.354<.001<.00134
UCECCIP2A →-0.950-0.333.004.00934
OVFAM219B →+0.522+0.265<.001<.00134
BRCASECISBP2 →+0.457+0.338<.001<.00134
BRCAKLRG2 →-1.549-0.447<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,311 associations by consensus.

GNAQ vs GNA14 — BRCA

Per-sample scatter of GNAQ vs GNA14 in BRCA (Pearson r = 0.27).

Explore this scatter interactively →

Exploration