GNA13

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GNA13 protein abundance is significantly associated with the RNA expression of many other genes, with 19,451 significant associations in total. GBM shows the largest number of these associations.

The most reproducible GNA13-associated genes across cancer lineages are KCTD2, IFFO1, and CYTH1. Each is linked with GNA13 in more than 5 cancer types. Because this analysis shows association rather than direction, both GNA13-to-partner and partner-to-GNA13 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GNA13 versus KCTD2 in BRCA, with a Pearson correlation of 0.45.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GNA13→partner) and Y-score (partner→GNA13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAKCTD2 →+0.369+0.244<.001<.00135
OVIFFO1 →+0.945+0.288<.001.00134
HNSCCYTH1 →+0.855+0.262<.001<.00134
OVCRTAM →+0.743+0.343.001.00334
OVBIN2 →+0.850+0.265<.001.00534
OVGZMK →+1.471+0.384<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 19,451 associations by consensus.

GNA13 vs KCTD2 — BRCA

Per-sample scatter of GNA13 vs KCTD2 in BRCA (Pearson r = 0.45).

Explore this scatter interactively →

Exploration