GNA12

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, GNA12 RNA differs between tumor and matched normal tissue in 15 of 18 cancer types tested, making tumor–normal expression one of GNA12’s most consistent transcriptional readouts.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where GNA12 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types GNA12 is over-expressed in tumor, although a few such as THCA and KICH show the opposite, repressed pattern.

HNSC, KIRC, and LIHC are the cancer types where GNA12 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in GNA12 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
HNSCFemaleIV+2.520<.00112view →
KIRCAllAll+0.406<.00111view →
LIHCFemaleII,III,IV+1.369<.0019view →
LUADAllII,III,IV+0.513<.0019view →
COADFemaleAll+0.425<.0016view →
THCAAllAll−0.297<.0016view →
CHOLAllAll+2.103<.0015view →
STADMaleII,III,IV+1.086.0035view →
LUSCMaleAll+0.491<.0014view →
KICHFemaleAll−0.568.0023view →
KIRPAllAll+0.346.0183view →
BLCAMaleIV−1.367.0072view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 15 lineages.

GNA12–HNSC

Tumor-vs-normal expression box plot for GNA12 RNA in HNSC.

Open the HNSC breakdown →

Exploration