GMPR

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GMPR mutation is significantly associated with the total protein of many other genes, with 7 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GMPR-associated genes across cancer lineages are Rab25, ATM, and Tuberin_pT1462. Each is linked with GMPR in more than 1 cancer types. Because this analysis shows association rather than direction, both GMPR-to-partner and partner-to-GMPR results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Rab25 grouped by GMPR-low versus GMPR-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GMPR→partner) and Y-score (partner→GMPR) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRab25 →-0.590-3.321<.001.01031
UCECATM →-0.802-2.986<.001.03531
UCECTuberin_pT1462 →+0.244+2.817.044.03621
UCECCaspase-8 →-0.285-3.169.030.01921
UCECClaudin-7 →-0.645-3.321.014.01021
UCECMEK1 →+0.620+3.321.001.01011
Each partner links to its Q-omics profile. Showing the 6 strongest of 7 associations by consensus.

Rab25 by GMPR expression — UCEC

Box plot of Rab25 in GMPR-low vs GMPR-high samples in UCEC.

Explore this box plot interactively →

Exploration