GMPPA

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GMPPA protein abundance is significantly associated with the RNA expression of many other genes, with 21,881 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GMPPA-associated genes across cancer lineages are XBP1, GMPPB, and BHLHA15. Each is linked with GMPPA in more than 7 cancer types. Because this analysis shows association rather than direction, both GMPPA-to-partner and partner-to-GMPPA results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GMPPA versus XBP1 in BRCA, with a Pearson correlation of 0.45.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GMPPA→partner) and Y-score (partner→GMPPA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAXBP1 →+1.968+0.354<.001<.00138
UCECGMPPB →+0.868+0.210<.001.00738
PDACBHLHA15 →+1.719+0.146<.001.00237
HNSCNASP →-0.845-0.355<.001<.00137
HNSCMRPS5 →-0.448-0.379.002<.00137
LSCCMEX3A →-1.246-0.392<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 21,881 associations by consensus.

GMPPA vs XBP1 — BRCA

Per-sample scatter of GMPPA vs XBP1 in BRCA (Pearson r = 0.45).

Explore this scatter interactively →

Exploration