GMIP

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GMIP RNA expression is significantly associated with the protein abundance of many other proteins, with 13,240 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible GMIP-associated proteins across cancer lineages are APBB1IP, PIK3R1, and PSMB10. Each is linked with GMIP in more than 7 cancer types. Because this analysis shows association rather than direction, both GMIP-to-partner and partner-to-GMIP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GMIP versus APBB1IP in OV, with a Pearson correlation of 0.42.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GMIP→partner) and Y-score (partner→GMIP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVAPBB1IP →+0.625+0.751.001.00638
CCRCCPIK3R1 →+0.312+0.582<.001<.00137
HNSCPSMB10 →+0.475+0.551<.001<.00137
GBMRAC2 →+0.892+0.661<.001<.00137
CCRCCITGAX →+0.723+0.576<.001<.00137
HNSCANKRD44 →+0.492+0.552<.001.00637
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,240 associations by consensus.

GMIP vs APBB1IP — OV

Per-sample scatter of GMIP vs APBB1IP in OV (Pearson r = 0.42).

Explore this scatter interactively →

Exploration